PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG041960.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 289aa    MW: 31400.2 Da    PI: 6.2577
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG041960.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.21.4e-08106153455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR++i  ++  L++l+P +    +k   Ka +L + ++Y++sLq
  TRIDC5AG041960.1 106 SHSLAERVRREKITLKMKMLQDLVPGC----NKVIGKALMLDEIINYVQSLQ 153
                       8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
AYGANARKRK APAAGAGKGK ETASCFAKMG EPTGPDSKKC KIEDETVRPK VEEEAATATA  60
SDGSAGGERG RKQAKGKGSK SKQPAADEPP RDYVHVRARR GQATDSHSLA ERVRREKITL  120
KMKMLQDLVP GCNKVIGKAL MLDEIINYVQ SLQQQVEFLS MKLSTVNPQL DFDTLSNLLH  180
KDMNQALGPS ASTVFPLESA GTVYPLCDQA DLYQSFSSGA MENQCSMGLL DMALPPAPQY  240
PFQKQQQDFW EASAQNGLHM DHEQSQENAG SAPNFDGQLQ AADHPEIEF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1741RKRKAPAAGAGKGKETASCFAKMGEPTGPDSKKCK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.38e-53bHLH family protein