PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG041960.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 282aa    MW: 30962.6 Da    PI: 5.2322
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG041960.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.31.4e-0899146455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR++i  ++  L++l+P +    +k   Ka +L + ++Y++sLq
  TRIDC5AG041960.2  99 SHSLAERVRREKITLKMKMLQDLVPGC----NKVIGKALMLDEIINYVQSLQ 146
                       8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
AEGAGRGRRQ GQGDRVLFRQ EMGEPTGPDS KKCKIEDETV RPKVEEEAAT ATASDGSAGG  60
ERGRKQAKGK GSKSKQPAAD EPPRDYVHVR ARRGQATDSH SLAERVRREK ITLKMKMLQD  120
LVPGCNKVIG KALMLDEIIN YVQSLQQQVE FLSMKLSTVN PQLDFDTLSN LLHKDMNQAL  180
GPSASTVFPL ESAGTVYPLC DQADLYQSFS SGAMENQCSM GLLDMALPPA PQYPFQKQQQ  240
DFWEASAQNG LHMDHEQSQE NAGSAPNFDG QLQAADHPEI EF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.19e-53bHLH family protein