PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG041960.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 289aa    MW: 31358.1 Da    PI: 6.3671
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG041960.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.21.4e-08113160455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR++i  ++  L++l+P +    +k   Ka +L + ++Y++sLq
  TRIDC5AG041960.3 113 SHSLAERVRREKITLKMKMLQDLVPGC----NKVIGKALMLDEIINYVQSLQ 160
                       8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
SVSDPAWAYG ANARKRKAPA AGAGKGKETA SCFAKMGEPT GPDSKKCKIE DETVRPKVEE  60
EAATATASDG SAGGERGRKQ AKGKGSKSKQ PAADEPPRDY VHVRARRGQA TDSHSLAERV  120
RREKITLKMK MLQDLVPGCN KVIGKALMLD EIINYVQSLQ QQVEFLSMKL STVNPQLDFD  180
TLSNLLHKDM NQALGPSAST VFPLESAGTV YPLCDQADLY QSFSSGAMEN QCSMGLLDMA  240
LPPAPQYPFQ KQQQDFWEAS AQNGLHMDHE QSQENAGSAP NFDGSYSEQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11448RKRKAPAAGAGKGKETASCFAKMGEPTGPDSKKCK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.36e-53bHLH family protein