PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG042970.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family SBP
Protein Properties Length: 74aa    MW: 8900.46 Da    PI: 11.6612
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG042970.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP513.8e-1612434778
                      SSEEETTT--SS--S-STTTT-------S--- CS
               SBP 47 srfhelsefDeekrsCrrrLakhnerrrkkqa 78
                      +rfh l efDe+krsCr+rL++hn+rrrk+q 
  TRIDC5AG042970.4 12 ARFHLLAEFDEAKRSCRKRLDGHNRRRRKPQV 43
                      7****************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 74 aa     Download sequence    
MFVFLTINLC FARFHLLAEF DEAKRSCRKR LDGHNRRRRK PQVDSMTSGS FMTRQQGIFL  60
IYNRFFLSAC RLLH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12441KRSCRKRLDGHNRRRRKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50670.13e-16SBP family protein