PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG043630.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 383aa MW: 43666.7 Da PI: 9.9387

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG043630.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.7	2.6e-08	78	122	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++WT+ E+++l+ v++ G+++W Ia +g+ Rt+ qc r+q TRIDC5AG043630.4 78 NAWTACEEKRLILTVQEKGMHNWINIAVALGTQRTPFQCLARYQR 122 68***************************99********96 PP
2	Myb_DNA-binding	46.6	7.9e-15	131	175	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +WT+eEd++lv av+ +G + W ++++ + gR ++qc +rw+k l TRIDC5AG043630.4 131 RAWTKEEDLQLVAAVQTFGCN-WQLVSASLV-GRIGNQCSNRWRKTL 175 68***************88.*****.**********975 PP
3	Myb_DNA-binding	44.6	3.3e-14	183	228	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 grW+++Ed++l+ vk + +g+W++Ia+ ++ gRt qc +rw+++l TRIDC5AG043630.4 183 GRWSEDEDKRLLVSVKFFRSGSWNKIAQFVP-GRTQSQCSERWRNVL 228 8****************************.**********986 PP
4	Myb_DNA-binding	35.3	2.6e-11	235	278	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g W +eEd +l+ v++ G+ W++Ia m +Rt+++c rw TRIDC5AG043630.4 235 GEWRPEEDSKLLASVHEVGPC-WSKIAGAMIPHRTDNMCLRRWKR 278 79***************88.*99999*********86 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
ETLIKDSLKN GSGDFSAVDM AYALTNTVGN FEATPEILRS VLPLVNWDYI AAMYLPGRSG 60 AECESRWLNH DDPRINHNAW TACEEKRLIL TVQEKGMHNW INIAVALGTQ RTPFQCLARY 120 QRSLNPHILK RAWTKEEDLQ LVAAVQTFGC NWQLVSASLV GRIGNQCSNR WRKTLIPERK 180 RVGRWSEDED KRLLVSVKFF RSGSWNKIAQ FVPGRTQSQC SERWRNVLDP DIDHGEWRPE 240 EDSKLLASVH EVGPCWSKIA GAMIPHRTDN MCLRRWKRLC QDELPLIVAA NQVKKSIFQN 300 NFVDRETERP AICPSDFPSL VYSKVDRGDE STVSDQVKKP QKRSRKSRVD NVPPNDPSKS 360 SAAAAAVNIT KRKSRKKLSG KWS

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

ETLIKDSLKN GSGDFSAVDM AYALTNTVGN FEATPEILRS VLPLVNWDYI AAMYLPGRSG  60
AECESRWLNH DDPRINHNAW TACEEKRLIL TVQEKGMHNW INIAVALGTQ RTPFQCLARY  120
QRSLNPHILK RAWTKEEDLQ LVAAVQTFGC NWQLVSASLV GRIGNQCSNR WRKTLIPERK  180
RVGRWSEDED KRLLVSVKFF RSGSWNKIAQ FVPGRTQSQC SERWRNVLDP DIDHGEWRPE  240
EDSKLLASVH EVGPCWSKIA GAMIPHRTDN MCLRRWKRLC QDELPLIVAA NQVKKSIFQN  300
NFVDRETERP AICPSDFPSL VYSKVDRGDE STVSDQVKKP QKRSRKSRVD NVPPNDPSKS  360
SAAAAAVNIT KRKSRKKLSG KWS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	337	343	VKKPQKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18100.2	1e-107	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG043630.4