PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG043900.10
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 197aa    MW: 21729.4 Da    PI: 6.684
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG043900.10genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.27.9e-10116163455
                        HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +h+  Er RR+ri +++  L++l+P +    +k   Ka iL + ++Y++sLq
  TRIDC5AG043900.10 116 SHSLSERVRRERISERMRMLQSLVPGC----DKVTGKALILDEIINYVQSLQ 163
                        799***********************9....555*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MEGFSHLPQQ MEYGLTNAGS FLLCHGNPED APAAAAASRE GSSVVLDTPL VATASVEKKR  60
KPKEDTTSLN SAHSKETKES TRKRGGKKQG KEMDDDEEEP KGYIHVRARR GQATDSHSLS  120
ERVRRERISE RMRMLQSLVP GCDKVTGKAL ILDEIINYVQ SLQNQVEFLS MRIASLSPVV  180
YGFGMESEAA FSDQSQV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15891KKRKPKEDTTSLNSAHSKETKESTRKRGGKKQGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.21e-38bHLH family protein