PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG043900.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 228aa    MW: 25135 Da    PI: 8.4485
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG043900.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.91e-0982129455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+  Er RR+ri +++  L++l+P +    +k   Ka iL + ++Y++sLq
  TRIDC5AG043900.8  82 SHSLSERVRRERISERMRMLQSLVPGC----DKVTGKALILDEIINYVQSLQ 129
                       799***********************9....555*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
AAASREGSSV VLDTPLVATA SVEKKRKPKE DTTSLNSAHS KETKESTRKR GGKKQGKEMD  60
DDEEEPKGYI HVRARRGQAT DSHSLSERVR RERISERMRM LQSLVPGCDK VTGKALILDE  120
IINYVQSLQN QVEFLSMRIA SLSPVVYGFG MESEAAFSDQ SQKIEGMFHD AAALPTGPPM  180
NRSSSPAPYQ AMMDTGTSSS SPTYSLQGTQ DFPGQRQQQQ QLHDANSR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12457KKRKPKEDTTSLNSAHSKETKESTRKRGGKKQGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.22e-38bHLH family protein