PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG046140.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 249aa    MW: 26829.1 Da    PI: 9.85
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG046140.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.94.3e-1757108255
               AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                        y+GVr++ + g+Wv+e+r+p   g k  r +lg+f tae+Aa+a++aa ++l g
  TRIDC5AG046140.1  57 LYRGVRRRGRVGQWVCEVRVP---GiKGSRLWLGTFNTAEMAARAHDAAVLALSG 108
                       69******************9...8777*********************999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
LPLHTSHERL RQLSTQMDVA DIASPSGQQE QGHRTVSSEP PKRPAGRTKF HETRHPLYRG  60
VRRRGRVGQW VCEVRVPGIK GSRLWLGTFN TAEMAARAHD AAVLALSGRA ACLNFADSAW  120
RMLPVLAAGS FGFGSASEIK AAVAVAVVAF QRKQIVLPVA VAVVALQQKQ VPIAVAVVAL  180
QQKQVPVAVA VVALQQLPVP VAVAVVALQQ QQIILPVACL APEFYMSSGD LLELDEEQWF  240
GGMEAGSYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.16e-26ERF family protein