PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG046140.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 241aa    MW: 25747.1 Da    PI: 12.4027
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG046140.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2544.1e-1750101255
               AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                        y+GVr++ + g+Wv+e+r+p   g k  r +lg+f tae+Aa+a++aa ++l g
  TRIDC5AG046140.2  50 LYRGVRRRGRVGQWVCEVRVP---GiKGSRLWLGTFNTAEMAARAHDAAVLALSG 101
                       69******************9...8777*********************999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
ERLRQLSTQM DVADIASPSG QQEQGHRTVS SEPPKRPAGR TKFHETRHPL YRGVRRRGRV  60
GQWVCEVRVP GIKGSRLWLG TFNTAEMAAR AHDAAVLALS GRAACLNFAD SAWRMLPVLA  120
AGSFGFGSAT GPDRRRRGGA PAEAGSGRRR RGGAPAAASS GRRRRRGAPA AADHSSSRVP  180
GARVLHVVRR PVGAGRGAVV WRHGGRIVLR ELGAGDARGA AGRKSEAGER RAERRPDAAM  240
E
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1134151RRRRGGAPAEAGSGRRRR
2135152RRRRGGAPAEAGSGRRRR
3148165RRRRGGAPAEAGSGRRRR
4149166RRRRGGAPAEAGSGRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.13e-25ERF family protein