PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG046170.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 216aa    MW: 24154.7 Da    PI: 5.1612
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG046170.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.91.9e-163993155
               AP2  1 sgykGVrwdkkrgrWvAeIrdpseng.kr.krfslgkfgtaeeAakaaiaarkkleg 55
                      + y+GVr++ + g+Wv+e+r+p   g ++  r++lg+f +a++Aa+a++ a+++l g
  TRIDC5AG046170.1 39 PVYRGVRRRGREGQWVCELRVPA--GsRSySRIWLGTFASAQMAARAHDSAALALSG 93
                      68*******************84..55456***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
FDGQEYRTVW PEEQEYRTVW SEPPKRRAGR NKLQETRHPV YRGVRRRGRE GQWVCELRVP  60
AGSRSYSRIW LGTFASAQMA ARAHDSAALA LSGRDACLNF ADSAWRMMPV HAAGSFKLAA  120
AQEIKDAVAV ALKEFQEQQR PADESTAPSS TAEESALSII PSDLSGLDNE HWIGGMEAGS  180
YYASLAQGML MEPPADGAWR EDREHDDGFD TSLWSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.11e-25ERF family protein