PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG046180.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 203aa    MW: 22032.1 Da    PI: 8.4935
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG046180.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.37e-174192255
               AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                       y+GVr++ + g+Wv+e+r+p   g k  r +lg+f tae+Aa+a++aa ++l g
  TRIDC5AG046180.1 41 LYRGVRRRGRVGQWVCEVRVP---GvKGSRLWLGTFTTAEMAARAHDAAVLALSG 92
                      69******************9...8777*********************999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MDVADAASKS GQHEQGHRTV SSEPPKRPAG RTKFHETRHP LYRGVRRRGR VGQWVCEVRV  60
PGVKGSRLWL GTFTTAEMAA RAHDAAVLAL SGRAACLNFA DSAWRMLPVL AAGSFGFGSA  120
REIKLAVAVA VVAFQQQQII LPVACPTVEA AASPSNSLFY MSSVDLLELD EEQWFGGMDA  180
GSYYESLAQG MLMAPPDDRA RRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.18e-28ERF family protein