PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG046220.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 222aa    MW: 24835.6 Da    PI: 4.8622
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG046220.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.85.7e-1850104156
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                       + y+GVr++ + g+Wv+e+r+p+++g + r +lg+f tae+Aa+a++ a+++l g+
  TRIDC5AG046220.1  50 PVYRGVRRRGREGQWVCELRVPVSRG-YSRLWLGTFATAEMAARAHDSAALALSGH 104
                       68*******************99988.9************************9886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
RVMDTVAAWQ QFEGQEYMTV WPEEQEYRTV WSEPPKRRAG RIKLQETRHP VYRGVRRRGR  60
EGQWVCELRV PVSRGYSRLW LGTFATAEMA ARAHDSAALA LSGHDACLNF ADSAWRMMPV  120
HATGSFRFAP AQEIKDAVAV ALEAFQEQHH ADASTTEASA PSITSSDLSG LDDELLIDGM  180
DAGSYYASLA QGMLMEPPAA GAWREDHEHD DGFDTPTSLW SY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.14e-28ERF family protein