PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG046240.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 222aa    MW: 23958.1 Da    PI: 4.7748
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG046240.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.83.5e-153588156
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                      + y+GVr++ + grWv+e+r+p ++g   r +lg++  ae A +a++a +++l g+
  TRIDC5AG046240.1 35 PVYRGVRRRGSAGRWVCEVRVPGKRG--ERLWLGTYVAAESATRAHDATMLALLGH 88
                      68*******************95544..************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
SSSTSGHEHG EVVLVWSPAA KRPAGRTKFK ETRHPVYRGV RRRGSAGRWV CEVRVPGKRG  60
ERLWLGTYVA AESATRAHDA TMLALLGHSA SAAACLNFPD SAWLLVMPPW LSDLADIRRA  120
AIEAVAIFLC LEAAAVVPII DEATSPVYLP SPVDNADEVF QVPTFSAQSS DMFELDMSGE  180
MDLDAYYAGF AQGMLLEPPP TPTYWENGEC GDGGAAAGLW SY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.14e-31ERF family protein