PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG046300.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 245aa    MW: 25741.5 Da    PI: 6.3426
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG046300.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.72.6e-174799155
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      + ++GVr++ ++grWv+e+r+p ++g   r +lg++ tae Aa+a++aa+++l+g
  TRIDC5AG046300.1 47 PVFHGVRRRGSNGRWVCEVRVPGKRG--ERLWLGTHVTAEAAARAHDAAMLALYG 99
                      5799*****************95544..************************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MDTGPERNWN SPASPPSSLE QGMPTSPASP TPKRPAGRTK FKETRHPVFH GVRRRGSNGR  60
WVCEVRVPGK RGERLWLGTH VTAEAAARAH DAAMLALYGR TPAARLNYPD SAWLLAVPSS  120
LSDLADVRRA AIGAVVDFLR RQEAGASAGA VAEEAHVDGI ASAASAPDNA SSSAAAAHSQ  180
PPCANAGYEV PDALCHDMFE LHTSGEMDAG TYYADLAQGL LLEPPPPPSS GASSEHGDDA  240
ALWNH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.14e-25ERF family protein