PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG046310.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 238aa    MW: 24956.5 Da    PI: 4.8928
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG046310.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.72.2e-164395155
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      + y+GVr++ + grWv+e+r+p ++    r +lg++ ta+ Aa+a++aa++ l g
  TRIDC5AG046310.1 43 PVYRGVRRRGNAGRWVCEVRVPGQR--GERLWLGTYLTADAAARAHDAAMLGLLG 95
                      68*******************9444..4*********************997766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
RPPSAMDMTG SDQQWSSSSS PSSTSSHPKR PAGRTKFKET RHPVYRGVRR RGNAGRWVCE  60
VRVPGQRGER LWLGTYLTAD AAARAHDAAM LGLLGRSAAC LNFADSAWLL AVPPALADLA  120
AVRRAALAAV ADFQRRHAPN SAATVPADEE TSGASALSSA DNASGSSATS QPWAEGTFEV  180
PSALGSDMFE LDLSGEMDLG TYYADLADGL LLEPPPSLDS GACWDTGDGG ADSGLWSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25490.14e-30ERF family protein