PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG047250.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 336aa    MW: 37063.1 Da    PI: 8.4469
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG047250.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2384.1e-1278126355
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       + G+r+++ r rW AeIrdp     +  r +lg+f +aee a+a++  +++++g
  TRIDC5AG047250.1  78 FMGIRQRS-RARWGAEIRDPI----KgVRLWLGTFNSAEEVARAYDVEARRIHG 126
                       78***999.8*********72....46************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
RRVVEAVLWP DKKEPWWCGG GSRGFMGLGG LGVELGFDND DVGFKANFKE LDDLSTMTAN  60
DVDGSAQRSA KRKSKNQFMG IRQRSRARWG AEIRDPIKGV RLWLGTFNSA EEVARAYDVE  120
ARRIHGKKAK INFPEEPKLP QKSRAPPASP KVPKPSAAQE HSFIPAFNNL VNQNAFVYPS  180
AHFASKQPLV QPENVPFVPP MSTIAPIEAP VMNMYSDQGS NSFGFSKLGW KYHTKTPDIS  240
SIAPISTIAE GAEPVLVKNN TYNSLAPPIM DNNVVNFEPW MRYLMDDSVD EMIDSLLNFD  300
VPRDVISNGT FGASMPCPSV AIFSVGSKPC ISGQRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72360.21e-28ERF family protein