PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG047450.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 240aa MW: 26857.3 Da PI: 4.3876

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG047450.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.2	5e-10	42	65	23	47
-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqky 47 +W++Ia++++ gRt++++k++w+++ TRIDC5AG047450.1 42 RWSKIAAKLP-GRTDNEIKNHWNTH 65 5*******.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MQIIYLIILK SYEILNALLK AFVYFPYVYY YLVLILSMAL CRWSKIAAKL PGRTDNEIKN 60 HWNTHIKKKL IKMGIDPITH VPLEVRKQPQ QASLSTMSAQ SSTITIECKS NNGQQCQQQD 120 THINRDKDAS SVGGESSPPN LSGTNTDNTT GGSNNIHDQD PLVKWLLEEE DDLPAIGIIE 180 EPWLDFIVEN DVDKFNGIPS TMSWDIGTTD WLLDYQDFGV GDSTLLDDAS MVDSSSGSNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16600.1	1e-21	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG047450.1