PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG050380.10
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 186aa    MW: 20317.7 Da    PI: 6.8538
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG050380.10genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY87.51.2e-273796258
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
               WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58
                       +Dg++WrKYGqK++ gs +pr+Y+rCt++   gCpv+k+v+r+++dp +++++Y+geH++
  TRIDC5AG050380.10 37 EDGFSWRKYGQKDIIGSMHPRAYFRCTHRhvkGCPVTKQVQRTSTDPLLFDVVYHGEHTC 96
                       8***************************99999*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MTCFCLSRSN NHRKSKRITQ VRMQVRVGSV QDNSALEDGF SWRKYGQKDI IGSMHPRAYF  60
RCTHRHVKGC PVTKQVQRTS TDPLLFDVVY HGEHTCLDSV GSPATSCGHV AGVEVMSRSR  120
PGVGFVSQSQ AACSSQVMSS EVVSGSGSTA GLWGDEIDMP DPDRDDTGIS ADYLDGYELD  180
VSAFFA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.14e-28WRKY family protein