PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG050710.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 314aa MW: 36826 Da PI: 8.3099

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG050710.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	82.5	7e-26	28	122	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYn+YA+e GFsvrks+ + n+ i+ r+ vCs++g+re+++ k ++ +rr+r+ tr+gC+akl++++++ +g+w v++++ eH+H+l TRIDC5AG050710.1 28 EFYNKYAREKGFSVRKSYVEWDGSNKYIIIRKIVCSRQGFREDKHMKrkmEDGKRRPRSLTRVGCNAKLVITRQEeTGRWFVKDFVDEHSHPL 120 6****************************************999888888999***************99**************9 PP FAR1 90 ap 91 ap TRIDC5AG050710.1 121 AP 122 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
MAYASDESMF EYVNVVSKMF DSEAEDYEFY NKYAREKGFS VRKSYVEWDG SNKYIIIRKI 60 VCSRQGFRED KHMKRKMEDG KRRPRSLTRV GCNAKLVITR QEETGRWFVK DFVDEHSHPL 120 APRDLSCLLR SHRRISDEQK ADIADMEKCG IRKYRIMDIL CFQYGGFDKV GCIKRDVYNF 180 CHANKQEIIS AGDAKTVIMH MMARRERDVD FFFKYLVDEH GHLKGLFRAD SQSRLDYEAF 240 GDVIVFDSTY RTNKYNLPFV PFVGLNHHRS TVIFGCGILS HETSQAYEWM LRTFSDCMAQ 300 KHPISVITDG DLAM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-64	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG050710.1