PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG053140.12
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 393aa    MW: 43577.1 Da    PI: 5.4617
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG053140.12genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.69.3e-132771999
                       -HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                 B3 19 pkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                       p++ +++  ++++  s  ++le+++gr+++v++   k+   ++lt+GW++Fv+an++++gD ++F + g+s+f  +v++f++
  TRIDC5AG053140.12  2 PREVTSQLtDLIP-DSEPIKLETPDGRTYSVEF--AKYV-LIILTTGWRDFVEANHIQQGDPMLFVYGGNSTF--KVHIFNS 77
                       6666655554443.4557***************..7765.689************************999999..9999875 PP
2B331.72.7e-101762353698
                        EEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                 B3  36 ltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                        +++  ++  ++ v    + +++++vl++GW +Fv +++++++Df++F  +g  +++l+v v++
  TRIDC5AG053140.12 176 VKIVAPDKSTYIVGA-KKHNDDQIVLQSGWDRFVTDQRIQQNDFLIFIIEG--GTRLKVLVLD 235
                        666666777777777.3556667*************************765..6667888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    
IPREVTSQLT DLIPDSEPIK LETPDGRTYS VEFAKYVLII LTTGWRDFVE ANHIQQGDPM  60
LFVYGGNSTF KVHIFNSPGR NKFLSSSEPP CDHHVPSEQV VPHPEHVDSS AHFGYTMLPG  120
SFVTKAQDDK LLEWANTIKS GFPLFVAAMD ESNVSLNDCH VYIPLWLVGQ FKEEVVKIVA  180
PDKSTYIVGA KKHNDDQIVL QSGWDRFVTD QRIQQNDFLI FIIEGGTRLK VLVLDPSGSE  240
KTFAMGNSSK VQEKPPLPPT VTNRSSEDNE VADLSSDDEV IDPSCDDDEV VGKDTTASRR  300
EQPLRSCRAK AETMASTSCP STKSGRRKAG NSNEAGLKAP MPNKSYILSE GASLSKQQEE  360
KVKEKVRAIG SDFPVFVRVM TVHGVWRPIQ LVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.15e-09B3 family protein