PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG053140.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 400aa MW: 45565.8 Da PI: 6.5638

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG053140.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	34	5.3e-11	4	62	36	99
EEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 36 ltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++le+++gr+++vk+ k gr++lt+GW++Fv+an+++e+ ++F + g+s+f +v++f++ TRIDC5AG053140.5 4 IKLETPDGRTYSVKF--FK-FGRITLTTGWRGFVDANHIEENNPMLFVYRGNSTF--KVQIFNS 62 89***********..44.46799**********************999999..9999976 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
SEPIKLETPD GRTYSVKFFK FGRITLTTGW RGFVDANHIE ENNPMLFVYR GNSTFKVQIF 60 NSSGRDKILP CSQPPCNHHV LNEQVVPHPE HVDSSAHFGY TMLPGSFVTK AQDDKLLEWA 120 NTIVWISSFC GSHGREQCQL DRLPCCKLHD VFSNHFLVML VILFMLIKIL VSFKPWLSLV 180 WHMQYIPLRL VDQFKEVVKI VALDKSIYVV GAKKHNEDQI VLQSGWDRFV TDQCIQQNDF 240 LIFIIQGETR LKVLVLDPSG SEKTFAMGNS SNAQEKPPLP PTVTNQSSED NELTDQSSDN 300 ELTDQSSDNE LTDLSSDDYE VLGTDTTTSR REQRPLQSCR AKAEKMGSTS CPSTKSDHSI 360 IVALCTSFHL PYFRLSTCGC RMLTTRKYGM FFRTQSWQLE

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

SEPIKLETPD GRTYSVKFFK FGRITLTTGW RGFVDANHIE ENNPMLFVYR GNSTFKVQIF  60
NSSGRDKILP CSQPPCNHHV LNEQVVPHPE HVDSSAHFGY TMLPGSFVTK AQDDKLLEWA  120
NTIVWISSFC GSHGREQCQL DRLPCCKLHD VFSNHFLVML VILFMLIKIL VSFKPWLSLV  180
WHMQYIPLRL VDQFKEVVKI VALDKSIYVV GAKKHNEDQI VLQSGWDRFV TDQCIQQNDF  240
LIFIIQGETR LKVLVLDPSG SEKTFAMGNS SNAQEKPPLP PTVTNQSSED NELTDQSSDN  300
ELTDQSSDNE LTDLSSDDYE VLGTDTTTSR REQRPLQSCR AKAEKMGSTS CPSTKSDHSI  360
IVALCTSFHL PYFRLSTCGC RMLTTRKYGM FFRTQSWQLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01580.1	1e-09	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG053140.5