PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG053140.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 233aa    MW: 26255.5 Da    PI: 6.2153
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG053140.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3406.9e-1347131999
                       HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3   9 dvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                       ++ k++ l++p +  ++  +++ + s  ++le+++gr+++vk+   k  gr++lt+GW++Fv+an+++e+  ++F + g+s+f  +v++f++
  TRIDC5AG053140.8  47 SHDKNH-LCIPWEVSSQLrDMI-PDSEPIKLETPDGRTYSVKF--FK-FGRITLTTGWRGFVDANHIEENNPMLFVYRGNSTF--KVQIFNS 131
                       445555.899999887777333.35567***************..44.46799************************999999..9999976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MDMGELFNPG CGGAGGAGCD CGDCEEWRRY CYWNHDHGTK QFLLFASHDK NHLCIPWEVS  60
SQLRDMIPDS EPIKLETPDG RTYSVKFFKF GRITLTTGWR GFVDANHIEE NNPMLFVYRG  120
NSTFKVQIFN SSGRDKILPC SQPPCNHHVL NEQVVPHPEH VDSSAHFGYT MLPGSFVTKA  180
QDDKLLEWAN TIVWISSFCG SHGREQCQLD RLPCLHTTEA CGPVQRGCQD SSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01580.11e-09B3 family protein