PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG054330.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family YABBY
Protein Properties Length: 197aa    MW: 22369.5 Da    PI: 9.8046
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG054330.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY234.23e-72171725170
             YABBY   5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvs 97 
                         +e+vCyv+CnfCntilavsvPs+s++++vtvrCGhCtsllsvnl+   q  ++++h         +e+ k ++ +++ n+  + ++s+++ 
  TRIDC5AG054330.1  17 APPEHVCYVHCNFCNTILAVSVPSNSMLNIVTVRCGHCTSLLSVNLRGLIQSPPVQDH--------SQENFKAHNISFRGNYPDYGTSSKYRM 101
                       679******************************************************9........7899999*********99999988887 PP

             YABBY  98 sekl.senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                        +++ +++++e++ ++ p    PekrqrvPsaynrfikeei+rik++nPdishreafs+aaknWahfP+ihfgl
  TRIDC5AG054330.1 102 PMMFsTKSDQEHMLHMRP---APEKRQRVPSAYNRFIKEEIRRIKTNNPDISHREAFSTAAKNWAHFPNIHFGL 172
                       767734556667777655...6**************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
RRYLATSARE IMSAQIAPPE HVCYVHCNFC NTILAVSVPS NSMLNIVTVR CGHCTSLLSV  60
NLRGLIQSPP VQDHSQENFK AHNISFRGNY PDYGTSSKYR MPMMFSTKSD QEHMLHMRPA  120
PEKRQRVPSA YNRFIKEEIR RIKTNNPDIS HREAFSTAAK NWAHFPNIHF GLGSNESSKK  180
LDEAIAAPIP QKVQGLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26580.19e-63YABBY family protein