PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG054330.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

YABBY

Protein Properties

Length: 105aa MW: 11487.3 Da PI: 8.3998

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG054330.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	98.6	1.4e-30	6	71	5	72
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeell 72 +e+vCyv+CnfCntilavsvPs+s++++vtvrCGhCtsllsvnl+ q ++++h ++ e+++ TRIDC5AG054330.7 6 APPEHVCYVHCNFCNTILAVSVPSNSMLNIVTVRCGHCTSLLSVNLRGLIQSPPVQDH--SQGVERMV 71 679******************************************************9..44444433 PP

Sequence ? help Back to Top
Protein Sequence Length: 105 aa Download sequence
MSAQIAPPEH VCYVHCNFCN TILAVSVPSN SMLNIVTVRC GHCTSLLSVN LRGLIQSPPV 60 QDHSQGVERM VSTPTGRERR ISRPTISAFV EITRTMAHLL NTGCQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26580.1	5e-19	YABBY family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG054330.7