PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG054530.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 336aa    MW: 35910.4 Da    PI: 9.4509
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG054530.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA97.81.1e-30172228158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       d+p+YVNaKQy++Il+RR +Rak+e+e++l  k+rkpylheSRh+hA+rR+Rg+gGrF
  TRIDC5AG054530.3 172 DAPIYVNAKQYEGILRRRRARAKVERENQL-VKGRKPYLHESRHRHAMRRARGTGGRF 228
                       68****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
PAAPAVALAA MMSFKGHDGF GQASNGGGGG ASVPWWTVSQ MLYGEPGASL SSSPEAEPRR  60
DAQFQVVPRA QGILDPLPAP KSGAPEVLKF SVFQGNLESG GNKGEKPMEH SATIALQSPL  120
PEYNSRFEFG PGPSMMSSGY PSAEQCYGLL TTYAMKSTPG GRLLLPLNAT ADAPIYVNAK  180
QYEGILRRRR ARAKVERENQ LVKGRKPYLH ESRHRHAMRR ARGTGGRFLN TKKEGNGKDA  240
GGGGKRAECA PPTRFATSPS SVIPSNPHSR SSISSLSGSE VSSMYDHDDV DHYNSIEHLR  300
TPFFTPLPII MDGEHGASAP FKWATAADGC CELLKA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1213222RHRHAMRRAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.26e-24NF-YA family protein