PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG054530.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 263aa    MW: 28743.4 Da    PI: 10.1248
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG054530.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA98.47.6e-3199155158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       d+p+YVNaKQy++Il+RR +Rak+e+e++l  k+rkpylheSRh+hA+rR+Rg+gGrF
  TRIDC5AG054530.5  99 DAPIYVNAKQYEGILRRRRARAKVERENQL-VKGRKPYLHESRHRHAMRRARGTGGRF 155
                       68****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
WIHCRRPRAG LLRSSSSRCS KGNLESGGNK GEKPMEHSAT IALQSPLPEY NSRFEFGPGP  60
SMMSSGYPSA EQCYGLLTTY AMKSTPGGRL LLPLNATADA PIYVNAKQYE GILRRRRARA  120
KVERENQLVK GRKPYLHESR HRHAMRRARG TGGRFLNTKK EGNGKDAGGG GKRAECAPPT  180
RFATSPSSVI PSNPHSRSSI SSLSGSEVSS MYDHDDVDHY NSIEHLRTPF FTPLPIIMDG  240
EHGASAPFKW ATAADGCCEL LKA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1140149RHRHAMRRAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.32e-23NF-YA family protein