PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG055150.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 483aa MW: 51428.4 Da PI: 6.9871

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG055150.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	51.6	1.7e-16	306	352	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K +Ka++L +A+eY+k Lq TRIDC5AG055150.4 306 VHNLSERRRRDRINEKMRALQELIPHC-----NKTDKASMLDEAIEYLKTLQ 352 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MSQFVPDWGN MGDISRPLGE DDDLMELLWC NGNVVMQSQG HRKLPPRPEK VPAPPVVQED 60 EAGLWFPFAL ADSLDKDIFQ DLFCEEPPGA NAGKIGRDGV PVLGDDRRSS QSSAVSAASD 120 LMPPPKSTHV SCSSRQQSMS LADCGDNAGG VLSDLVQARA GKAAMEEGAS STLSAMGASF 180 CGSNQVQVQG AVSEQGRAGH TTAYGGGGAG SALPSAVGSG NANARGRGHE ATVASSSGRS 240 NYSFGVTTTT GTEPTSTSHR SSKRKRGLDT EDSESPSEDA ESESLALERK PPQKLTTARR 300 SRAAEVHNLS ERRRRDRINE KMRALQELIP HCNKTDKASM LDEAIEYLKT LQMQVQMMWM 360 GGGMAPPAVM FPGMQMHQYL PQMGPPSMAR MPFMAPPQQG HGVSLPEQYA HFLGVNPHHL 420 QPPSHHPHHH QHFAQAVGYY PLGAKALQQS PALHHVPNGN TGAGAPAATA NTAPGNAIHP 480 NKR

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MSQFVPDWGN MGDISRPLGE DDDLMELLWC NGNVVMQSQG HRKLPPRPEK VPAPPVVQED  60
EAGLWFPFAL ADSLDKDIFQ DLFCEEPPGA NAGKIGRDGV PVLGDDRRSS QSSAVSAASD  120
LMPPPKSTHV SCSSRQQSMS LADCGDNAGG VLSDLVQARA GKAAMEEGAS STLSAMGASF  180
CGSNQVQVQG AVSEQGRAGH TTAYGGGGAG SALPSAVGSG NANARGRGHE ATVASSSGRS  240
NYSFGVTTTT GTEPTSTSHR SSKRKRGLDT EDSESPSEDA ESESLALERK PPQKLTTARR  300
SRAAEVHNLS ERRRRDRINE KMRALQELIP HCNKTDKASM LDEAIEYLKT LQMQVQMMWM  360
GGGMAPPAVM FPGMQMHQYL PQMGPPSMAR MPFMAPPQQG HGVSLPEQYA HFLGVNPHHL  420
QPPSHHPHHH QHFAQAVGYY PLGAKALQQS PALHHVPNGN TGAGAPAATA NTAPGNAIHP  480
NKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	311	316	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20180.1	3e-25	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG055150.4