PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG055690.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 258aa    MW: 28955 Da    PI: 8.1184
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG055690.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH283.9e-09112156554
                       HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       h +rEr+RR+++ ++++ L  ++ ++      K +K +i++ A  YI++L
  TRIDC5AG055690.2 112 HMMRERQRREKLSQSYADLHAMVSSR-----SKQDKNSIVQSAAVYIHEL 156
                       889**********************8.....6***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MQMDSYYFHD DAHFFAGCGV PGSPDLPFAD LIASLSEPLP EVARQSAFRE YRGVGLELPG  60
TARGGTGNGI NIHRRMMDVL GRMGPATEEE QRPQHQQQQA AGAVESSRGF RHMMRERQRR  120
EKLSQSYADL HAMVSSRSKQ DKNSIVQSAA VYIHELKVAK EQLQRRNDEL KAKILGHDAQ  180
QQCVKVQFEV DEPSSSIDSM IGALTRLKSM NVKTRGIHSI LSGQRLTTEM NVETTYVIAL  240
LDRDCIIDTI TMRIVKLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.12e-27bHLH family protein