PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG056090.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 162aa    MW: 17893.1 Da    PI: 5.0484
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG056090.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind75.77.9e-2466124260
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60 
                       Fl+k+ye+++d+++++++sw   gn+fvv+d + f+  +Lp+yFkhsnf+SFvRQLn+Y
  TRIDC5AG056090.3  66 FLNKTYEVVDDHSTDTIVSWGVAGNTFVVWDAHAFSMVLLPRYFKHSNFSSFVRQLNTY 124
                       9*********************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MDPFHGIVKE EEFDFAGGAA DGYSPSSWGS SPSSWGSSPS SWAGGGALAE LPRPMDGLGE  60
ACPTPFLNKT YEVVDDHSTD TIVSWGVAGN TFVVWDAHAF SMVLLPRYFK HSNFSSFVRQ  120
LNTYVSFCRL VYALFLLYQY PSIHLSMAIA WQNVMQCNSN RT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.17e-35HSF family protein