PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG056440.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 203aa    MW: 21021.4 Da    PI: 6.2612
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG056440.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.71.9e-151766256
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                       y+G+r  ++ g+Wv+eIr+p+    + +r++lg+f ta++Aa a++ a+ +l+g+
  TRIDC5AG056440.1 17 LYRGIR--SRYGKWVSEIREPR----KaRRIWLGTFPTADMAAVAYDVAAHALRGA 66
                      69***5..779*********94....36*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
AAIALADQSM SSGKHPLYRG IRSRYGKWVS EIREPRKARR IWLGTFPTAD MAAVAYDVAA  60
HALRGADAAL NFPGLAATRP APASTSADGI RAAAAAAAAS IRHDRTSGGI TPAAAGSAVQ  120
QQLGGTGSSA AAASASGTAQ QDQAGIGLNQ YFLDEEALFE TPQFLRNMAA GMMMSPPRLS  180
PDSCDESPDP SEAGESLWSY RDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.11e-23ERF family protein