PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG057020.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 169aa    MW: 19367.6 Da    PI: 10.1818
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG057020.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF86.71.3e-271059251
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      rienk+ rqvtf+kRrng+lKKA+ELS LCdaeva+++fs+ g+ly +ss
  TRIDC5AG057020.1 10 RIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALVLFSHAGRLYQFSS 59
                      9***********************************************96 PP
2K-box74.33.3e-25841581084
             K-box  10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkke 84 
                       ++ ++++ + e+  Lk+++e Lqr+qR+llGedL +Ls  eL+qLe q+ k l++iRs+K+++ll+++ +l++k 
  TRIDC5AG057020.1  84 TTDEMQNNYLEYMELKARVEVLQRSQRNLLGEDLAPLSTIELEQLEGQVGKTLRQIRSRKTQVLLDEMCDLKRKV 158
                       56789*******************************************************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MGRGKVVLQR IENKISRQVT FAKRRNGLLK KAYELSLLCD AEVALVLFSH AGRLYQFSSS  60
SNMLKTLEKY QRYIFASQDA AVPTTDEMQN NYLEYMELKA RVEVLQRSQR NLLGEDLAPL  120
STIELEQLEG QVGKTLRQIR SRKTQVLLDE MCDLKRKVAL KILSISVAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15800.12e-68MIKC_MADS family protein