PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG057020.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MIKC_MADS

Protein Properties

Length: 238aa MW: 27466.6 Da PI: 9.0121

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG057020.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	85.8	2.5e-27	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rienk+ rqvtf+kRrng+lKKA+ELS LCdaeva+++fs+ g+ly +ss TRIDC5AG057020.2 10 RIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALVLFSHAGRLYQFSS 59 9***********************************************96 PP
2	K-box	87.8	2.1e-29	84	173	10	99
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++ ++++ + e+ Lk+++e Lqr+qR+llGedL +Ls eL+qLe q+ k l++iRs+K+++ll+++ +l++ke+ lq++n++L++kl TRIDC5AG057020.2 84 TTDEMQNNYLEYMELKARVEVLQRSQRNLLGEDLAPLSTIELEQLEGQVGKTLRQIRSRKTQVLLDEMCDLKRKEQILQDANMTLKRKLG 173 567899*********************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence
MGRGKVVLQR IENKISRQVT FAKRRNGLLK KAYELSLLCD AEVALVLFSH AGRLYQFSSS 60 SNMLKTLEKY QRYIFASQDA AVPTTDEMQN NYLEYMELKA RVEVLQRSQR NLLGEDLAPL 120 STIELEQLEG QVGKTLRQIR SRKTQVLLDE MCDLKRKEQI LQDANMTLKR KLGEIELEAT 180 PDPPQQPQQQ QMWQGDRGVP PHTPPQPEHF FQALERYPSL QPVFRGMDVN QPPPAWMA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02310.1	6e-72	MIKC_MADS family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG057020.2