PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG057800.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 243aa    MW: 25376.5 Da    PI: 9.2567
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG057800.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.65.8e-05173218454
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       + n+r r R +r+ +++  L++l+ +      +K + a++L +A  YI+ L
  TRIDC5AG057800.2 173 SSNKRPRARKERLGERILALQQLVSPF-----GKTDTASVLHEALGYIRFL 218
                       679***********************8.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MVKEEEVMAE AGGGGGGGRG YMDMLGLGEE AMADYFLCLS PSSSAAISTT TSASASTHAV  60
ASPTCASYLQ PPPAAPYHHV LRFGGRAEQQ YHGGGDVFGF QYYYYGAGGP AIPVAAPQKS  120
SPTTDCSSSI SSMSSSPTAT AASVISTSKP QPTKKRGSRS SGDQRKAAPP AASSNKRPRA  180
RKERLGERIL ALQQLVSPFG KTDTASVLHE ALGYIRFLHD QVQVLSSPYM QRLPPPPSPA  240
PLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19500.17e-24bHLH family protein