PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG057800.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 229aa    MW: 24154.1 Da    PI: 9.6685
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG057800.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.85.3e-05149194454
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       + n+r r R +r+ +++  L++l+ +      +K + a++L +A  YI+ L
  TRIDC5AG057800.3 149 SSNKRPRARKERLGERILALQQLVSPF-----GKTDTASVLHEALGYIRFL 194
                       679***********************8.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
LGLGEEAMAD YFLCLSPSSS AAISTTTSAS ASTHAVASPT CASYLQPPPA APYHHVLRFG  60
GRAEQQYHGG GDVFGFQYYY YGAGGPAIPV AAPQKSSPTT DCSSSISSMS SSPTATAASV  120
ISTSKPQPTK KRGSRSSGDQ RKAAPPAASS NKRPRARKER LGERILALQQ LVSPFGKTDT  180
ASVLHEALGY IRFLHDQVQV LSSPYMQRLP PPPSPAPLPE EPRAPNDLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19500.18e-24bHLH family protein