PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG058920.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 132aa    MW: 15016.7 Da    PI: 8.7427
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG058920.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.22.3e-1465116155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s y+GV++++++grW A+I  +s    +k  +lg+f  + +Aa+a++ a+ k++g
  TRIDC5AG058920.6  65 SVYRGVTRHHQQGRWQARIGRVSG---NKDLYLGTFSAEADAAEAYDVAAIKFRG 116
                       78****************999754...5**********99************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    
GGYDMEEKAA RAYDLAALKY WGASTHINFP VEDYQEELEV MKNMTRQEYV AHLRRKSSGF  60
SRGASVYRGV TRHHQQGRWQ ARIGRVSGNK DLYLGTFSAE ADAAEAYDVA AIKFRGLNAV  120
TNFDINRYDV DK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.16e-72AP2 family protein