PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG059630.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 227aa    MW: 25268.4 Da    PI: 7.3461
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG059630.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM161.63e-50281612128
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                        pG+rFhPtdeelv++yL++kv++k+l++ evi+e+diyk++PwdLp +++ ++ekewyfF+ r +ky+++ r+nr+t sg+Wkatg d++++
  TRIDC5AG059630.2  28 LPGYRFHPTDEELVTFYLRRKVARKSLRI-EVIREMDIYKHDPWDLPkASTVGGEKEWYFFCLRGRKYRNSIRPNRVTGSGFWKATGIDRPIY 119
                       69***************************.99***************445556889************************************* PP

               NAM  94 sk.......kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       s+       ++  +glkk+Lv+y+g+a kg+ktdW+mhe+rl
  TRIDC5AG059630.2 120 SAasggasgSSVSIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 161
                       *988777666666***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
AIEMEKATSD GEVVLGAGDE EDDDDVVLPG YRFHPTDEEL VTFYLRRKVA RKSLRIEVIR  60
EMDIYKHDPW DLPKASTVGG EKEWYFFCLR GRKYRNSIRP NRVTGSGFWK ATGIDRPIYS  120
AASGGASGSS VSIGLKKSLV YYRGSAGKGT KTDWMMHEFR LPPVAAAAAT NSSPSMQEAV  180
SGPRGVDHLQ DLQEDHHLPE AAAAVEAGAG AVRRHHHRRL ELQYREL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.15e-71NAC family protein