PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG059640.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 346aa MW: 38855.4 Da PI: 6.4293

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG059640.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	162	2.2e-50	38	168	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 pG+rFhPtdeelv++yL++kv++k+l++ evi+e+diyk++PwdLp +++ ++ekewyfF+ r +ky+++ r+nr+t+sg+Wkatg d++++ TRIDC5AG059640.1 38 LPGYRFHPTDEELVTFYLRRKVARKSLRI-EVIREMDIYKHDPWDLPkASTVGGEKEWYFFCLRGRKYRNSIRPNRVTSSGFWKATGIDRPIY 129 69*************************.99***********445556889*********************************** PP NAM 94 sk....kgelvglkktLvfykgrapkgektdWvmheyrl 128 s+ +g vglkk+Lv+y+g+a kg+ktdW+mhe+rl TRIDC5AG059640.1 130 SAggsgSGVSVGLKKSLVYYRGSAGKGTKTDWMMHEFRL 168 977766677**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MVAKAKMSAM ELEMEKVMSD GEVVLGGAGD EEEDDVVLPG YRFHPTDEEL VTFYLRRKVA 60 RKSLRIEVIR EMDIYKHDPW DLPKASTVGG EKEWYFFCLR GRKYRNSIRP NRVTSSGFWK 120 ATGIDRPIYS AGGSGSGVSV GLKKSLVYYR GSAGKGTKTD WMMHEFRLPP AAATNASPSM 180 QEAEVWTICR IFRRTITYRK QQQPWRPAPA PSAADSSSNT GSFQSSEASD EYMNCLQAPA 240 PAAPYIPQQQ QHHQYVSQTS TVDSGNFLYE DNMHNQQFQG EWNAAPAAPV PEQKQQNPLS 300 TAVALHQNDH SHAVAANDFY KVEGYLEEIA RMLEVTDSAG LYDYRS

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MVAKAKMSAM ELEMEKVMSD GEVVLGGAGD EEEDDVVLPG YRFHPTDEEL VTFYLRRKVA  60
RKSLRIEVIR EMDIYKHDPW DLPKASTVGG EKEWYFFCLR GRKYRNSIRP NRVTSSGFWK  120
ATGIDRPIYS AGGSGSGVSV GLKKSLVYYR GSAGKGTKTD WMMHEFRLPP AAATNASPSM  180
QEAEVWTICR IFRRTITYRK QQQPWRPAPA PSAADSSSNT GSFQSSEASD EYMNCLQAPA  240
PAAPYIPQQQ QHHQYVSQTS TVDSGNFLYE DNMHNQQFQG EWNAAPAAPV PEQKQQNPLS  300
TAVALHQNDH SHAVAANDFY KVEGYLEEIA RMLEVTDSAG LYDYRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43000.1	1e-76	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG059640.1