PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG059790.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 765aa MW: 87631.5 Da PI: 6.3659

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG059790.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.3	6.3e-24	49	135	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +YA ++GF+vrk s+k+ n+ + +r +vCskeg+r ++ ++ + +++rae rtgC+a+++v+ +++gk++vt+ + +HnH+l TRIDC5AG059790.4 49 EFYVSYAGTAGFNVRKGCSEKT-ANNVTRSRSYVCSKEGFRPKSVTA--EPKKQRAEIRTGCEAHMTVRITTSGKYVVTEYVADHNHDLE 135 6***************9999.66669***********9988..9999********************************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 765 aa Download sequence
MIVFPIVQPE SKEDEIVEAE QDPETEVVAG PGGEPKVGMV FLNEDKAYEF YVSYAGTAGF 60 NVRKGCSEKT ANNVTRSRSY VCSKEGFRPK SVTAEPKKQR AEIRTGCEAH MTVRITTSGK 120 YVVTEYVADH NHDLEAPLVD IQILRSQKLL AKLQQPPDPP KVVLIPNDYK NYVRTRHTKD 180 MQSGDAQAIS EYLQRMKGKN PSFFCSIQVD EDDQFRNVFW ADVKSVMDFN YFGDVVCVDT 240 RYSTSDYCRP LLLFIGVNHH KEPTIFGTAF IYDESVESFK WLFETFKSAM SGKQPRTVLT 300 DRSTAISDAV ASAWPGTAHR FSLLHLYQNA TKVLSDTFQG SETFAHDFSR SLYDYEEEGD 360 FLSSWEILLA KYNLKDNKWL SKLYEDRERW ALPYGRDIFC ADIAATLRSD NMDAILTGVL 420 KTEIDLPYFF NRYDKFLEEK RLAEQQADYL GVQMTQRVPP LRLLWQAANT YTPALFEMFR 480 LEFELVLSCM VYCCGEIGPI SEYEVTVKNR PQVHFVRFDS SEYMVVCSCK KFEFVGLPCC 540 HVLKVLEIKN IKELPPQYIL KRWRKDAQSE SPKENFGFAA VDEDPKFTVS KRHNSLYRTL 600 YKVAAKAAEN IEGQRFMESQ YDQLLEQVEL LLQAKLHDKP SLSTIMRSQQ PNLPQNDTSN 660 SEPRRASSKK NKNVENRRQQ QSPLESSKKK KGRQGLVEPE EAELPLRVLA PTISNDIPNH 720 MSTPTNQFLA PNHIMQAPYV TQQFGLNSLQ GFSGMTPFGQ VMDIF

Sequence ? help Back to Top

Protein Sequence Length: 765 aa Download sequence

MIVFPIVQPE SKEDEIVEAE QDPETEVVAG PGGEPKVGMV FLNEDKAYEF YVSYAGTAGF  60
NVRKGCSEKT ANNVTRSRSY VCSKEGFRPK SVTAEPKKQR AEIRTGCEAH MTVRITTSGK  120
YVVTEYVADH NHDLEAPLVD IQILRSQKLL AKLQQPPDPP KVVLIPNDYK NYVRTRHTKD  180
MQSGDAQAIS EYLQRMKGKN PSFFCSIQVD EDDQFRNVFW ADVKSVMDFN YFGDVVCVDT  240
RYSTSDYCRP LLLFIGVNHH KEPTIFGTAF IYDESVESFK WLFETFKSAM SGKQPRTVLT  300
DRSTAISDAV ASAWPGTAHR FSLLHLYQNA TKVLSDTFQG SETFAHDFSR SLYDYEEEGD  360
FLSSWEILLA KYNLKDNKWL SKLYEDRERW ALPYGRDIFC ADIAATLRSD NMDAILTGVL  420
KTEIDLPYFF NRYDKFLEEK RLAEQQADYL GVQMTQRVPP LRLLWQAANT YTPALFEMFR  480
LEFELVLSCM VYCCGEIGPI SEYEVTVKNR PQVHFVRFDS SEYMVVCSCK KFEFVGLPCC  540
HVLKVLEIKN IKELPPQYIL KRWRKDAQSE SPKENFGFAA VDEDPKFTVS KRHNSLYRTL  600
YKVAAKAAEN IEGQRFMESQ YDQLLEQVEL LLQAKLHDKP SLSTIMRSQQ PNLPQNDTSN  660
SEPRRASSKK NKNVENRRQQ QSPLESSKKK KGRQGLVEPE EAELPLRVLA PTISNDIPNH  720
MSTPTNQFLA PNHIMQAPYV TQQFGLNSLQ GFSGMTPFGQ VMDIF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-112	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG059790.4