PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG059790.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 793aa MW: 90806 Da PI: 7.1463

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG059790.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.2	6.6e-24	96	182	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +YA ++GF+vrk s+k+ n+ + +r +vCskeg+r ++ ++ + +++rae rtgC+a+++v+ +++gk++vt+ + +HnH+l TRIDC5AG059790.6 96 EFYVSYAGTAGFNVRKGCSEKT-ANNVTRSRSYVCSKEGFRPKSVTA--EPKKQRAEIRTGCEAHMTVRITTSGKYVVTEYVADHNHDLE 182 6***************9999.66669***********9988..9999********************************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 793 aa Download sequence
QTCLGQACQE IVSCQALAER RKRGDGGRFL SSDGPLPSER RSKRLEKQNL KNEKKPESKE 60 DEIVEAEQDP ETEVVAGPGG EPKVGMVFLN EDKAYEFYVS YAGTAGFNVR KGCSEKTANN 120 VTRSRSYVCS KEGFRPKSVT AEPKKQRAEI RTGCEAHMTV RITTSGKYVV TEYVADHNHD 180 LEAPLVDIQI LRSQKLLAKL QQPPDPPKVV LIPNDYKNYV RTRHTKDMQS GDAQAISEYL 240 QRMKGKNPSF FCSIQVDEDD QFRNVFWADV KSVMDFNYFG DVVCVDTRYS TSDYCRPLLL 300 FIGVNHHKEP TIFGTAFIYD ESVESFKWLF ETFKSAMSGK QPRTVLTDRS TAISDAVASA 360 WPGTAHRFSL LHLYQNATKV LSDTFQGSET FAHDFSRSLY DYEEEGDFLS SWEILLAKYN 420 LKDNKWLSKL YEDRERWALP YGRDIFCADI AATLRSDNMD AILTGVLKTE IDLPYFFNRY 480 DKFLEEKRLA EQQADYLGVQ MTQRVPPLRL LWQAANTYTP ALFEMFRLEF ELVLSCMVYC 540 CGEIGPISEY EVTVKNRPQV HFVRFDSSEY MVVCSCKKFE FVGLPCCHVL KVLEIKNIKE 600 LPPQYILKRW RKDAQSESPK ENFGFAAVDE DPKFTVSKRH NSLYRTLYKV AAKAAENIEG 660 QRFMESQYDQ LLEQVELLLQ AKLHDKPSLS TIMRSQQPNL PQNDTSNSEP RRASSKKNKN 720 VENRRQQQSP LESSKKKKGR QGLVEPEEAE LPLRVLAPTI SNDIPNHMST PTNQFLAPNH 780 IMQGTICYTA VWS

Sequence ? help Back to Top

Protein Sequence Length: 793 aa Download sequence

QTCLGQACQE IVSCQALAER RKRGDGGRFL SSDGPLPSER RSKRLEKQNL KNEKKPESKE  60
DEIVEAEQDP ETEVVAGPGG EPKVGMVFLN EDKAYEFYVS YAGTAGFNVR KGCSEKTANN  120
VTRSRSYVCS KEGFRPKSVT AEPKKQRAEI RTGCEAHMTV RITTSGKYVV TEYVADHNHD  180
LEAPLVDIQI LRSQKLLAKL QQPPDPPKVV LIPNDYKNYV RTRHTKDMQS GDAQAISEYL  240
QRMKGKNPSF FCSIQVDEDD QFRNVFWADV KSVMDFNYFG DVVCVDTRYS TSDYCRPLLL  300
FIGVNHHKEP TIFGTAFIYD ESVESFKWLF ETFKSAMSGK QPRTVLTDRS TAISDAVASA  360
WPGTAHRFSL LHLYQNATKV LSDTFQGSET FAHDFSRSLY DYEEEGDFLS SWEILLAKYN  420
LKDNKWLSKL YEDRERWALP YGRDIFCADI AATLRSDNMD AILTGVLKTE IDLPYFFNRY  480
DKFLEEKRLA EQQADYLGVQ MTQRVPPLRL LWQAANTYTP ALFEMFRLEF ELVLSCMVYC  540
CGEIGPISEY EVTVKNRPQV HFVRFDSSEY MVVCSCKKFE FVGLPCCHVL KVLEIKNIKE  600
LPPQYILKRW RKDAQSESPK ENFGFAAVDE DPKFTVSKRH NSLYRTLYKV AAKAAENIEG  660
QRFMESQYDQ LLEQVELLLQ AKLHDKPSLS TIMRSQQPNL PQNDTSNSEP RRASSKKNKN  720
VENRRQQQSP LESSKKKKGR QGLVEPEEAE LPLRVLAPTI SNDIPNHMST PTNQFLAPNH  780
IMQGTICYTA VWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-111	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG059790.6