PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG059790.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 906aa MW: 102670 Da PI: 7.8763

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG059790.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.9	7.9e-24	256	342	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +YA ++GF+vrk s+k+ n+ + +r +vCskeg+r ++ ++ + +++rae rtgC+a+++v+ +++gk++vt+ + +HnH+l TRIDC5AG059790.7 256 EFYVSYAGTAGFNVRKGCSEKT-ANNVTRSRSYVCSKEGFRPKSVTA--EPKKQRAEIRTGCEAHMTVRITTSGKYVVTEYVADHNHDLE 342 6***************9999.66669***********9988..9999********************************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 906 aa Download sequence
GEGKVGAHKK RGRKPGKKST PVIKVKNSVE KGVATAGTGN GQAVPSTENL GRGGDKKDAV 60 EKDVESVVEL EEEHVEVEDA AQDGAHDLGD GDDANSDAHE GEMEKEVEVK EKRGRGRPRK 120 AVTEDNALQA CVSTDLGVMA SQCAVDERKK ILNKYLSKRQ SRPASGRPAK IVSCQALAER 180 RKRGDGGRFL SSDGPLPSER RSKRLEKQNL KNEKKPESKE DEIVEAEQDP ETEVVAGPGG 240 EPKVGMVFLN EDKAYEFYVS YAGTAGFNVR KGCSEKTANN VTRSRSYVCS KEGFRPKSVT 300 AEPKKQRAEI RTGCEAHMTV RITTSGKYVV TEYVADHNHD LEAPLVDIQI LRSQKLLAKL 360 QQPPDPPKVV LIPNDYKNYV RTRHTKDMQS GDAQAISEYL QRMKGKNPSF FCSIQVDEDD 420 QFRNVFWADV KSVMDFNYFG DVVCVDTRYS TSDYCRPLLL FIGVNHHKEP TIFGTAFIYD 480 ESVESFKWLF ETFKSAMSGK QPRTVLTDRS TAISDAVASA WPGTAHRFSL LHLYQNATKV 540 LSDTFQGSET FAHDFSRSLY DYEEEGDFLS SWEILLAKYN LKDNKWLSKL YEDRERWALP 600 YGRDIFCADI AATLRSDNMD AILTGVLKTE IDLPYFFNRY DKFLEEKRLA EQQADYLGVQ 660 MTQRVPPLRL LWQAANTYTP ALFEMFRLEF ELVLSCMVYC CGEIGPISEY EVTVKNRPQV 720 HFVRFDSSEY MVVCSCKKFE FVGLPCCHVL KVLEIKNIKE LPPQYILKRW RKDAQSESPK 780 ENFGFAAVDE DPKFTVSKRH NSLYRTLYKV AAKAAENIEG QRFMESQYDQ LLEQVELLLQ 840 AKLHDKPSLS TIMRSQQPNL PQNDTSNSEP RRASSKKNKN VENRRQQQSP LESSKKKKGR 900 QGMFIT

Sequence ? help Back to Top

Protein Sequence Length: 906 aa Download sequence

GEGKVGAHKK RGRKPGKKST PVIKVKNSVE KGVATAGTGN GQAVPSTENL GRGGDKKDAV  60
EKDVESVVEL EEEHVEVEDA AQDGAHDLGD GDDANSDAHE GEMEKEVEVK EKRGRGRPRK  120
AVTEDNALQA CVSTDLGVMA SQCAVDERKK ILNKYLSKRQ SRPASGRPAK IVSCQALAER  180
RKRGDGGRFL SSDGPLPSER RSKRLEKQNL KNEKKPESKE DEIVEAEQDP ETEVVAGPGG  240
EPKVGMVFLN EDKAYEFYVS YAGTAGFNVR KGCSEKTANN VTRSRSYVCS KEGFRPKSVT  300
AEPKKQRAEI RTGCEAHMTV RITTSGKYVV TEYVADHNHD LEAPLVDIQI LRSQKLLAKL  360
QQPPDPPKVV LIPNDYKNYV RTRHTKDMQS GDAQAISEYL QRMKGKNPSF FCSIQVDEDD  420
QFRNVFWADV KSVMDFNYFG DVVCVDTRYS TSDYCRPLLL FIGVNHHKEP TIFGTAFIYD  480
ESVESFKWLF ETFKSAMSGK QPRTVLTDRS TAISDAVASA WPGTAHRFSL LHLYQNATKV  540
LSDTFQGSET FAHDFSRSLY DYEEEGDFLS SWEILLAKYN LKDNKWLSKL YEDRERWALP  600
YGRDIFCADI AATLRSDNMD AILTGVLKTE IDLPYFFNRY DKFLEEKRLA EQQADYLGVQ  660
MTQRVPPLRL LWQAANTYTP ALFEMFRLEF ELVLSCMVYC CGEIGPISEY EVTVKNRPQV  720
HFVRFDSSEY MVVCSCKKFE FVGLPCCHVL KVLEIKNIKE LPPQYILKRW RKDAQSESPK  780
ENFGFAAVDE DPKFTVSKRH NSLYRTLYKV AAKAAENIEG QRFMESQYDQ LLEQVELLLQ  840
AKLHDKPSLS TIMRSQQPNL PQNDTSNSEP RRASSKKNKN VENRRQQQSP LESSKKKKGR  900
QGMFIT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	112	120	KRGRGRPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-111	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG059790.7