PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG059870.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 449aa    MW: 50556.9 Da    PI: 7.0394
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG059870.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS403.91.6e-123814482373
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                       ++++++c +a +++d   ++ l+++l++l+s +gdpmqRl ay++e+L arl+ s+s+lyk+l+++e +   sse ++ ++ +se++P+++fs
  TRIDC5AG059870.1  81 KQVIIACGKAAAENDI-HTEVLISELRQLVSISGDPMQRLGAYMLEGLVARLSFSGSKLYKSLKCKEPT---SSELISHMHHLSEICPFYRFS 169
                       7889999999888776.689************************************************9...999999999************ PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       ++ aN aI ea+++e+ vHiiDf i qG QW+++++aLa+R++gpp lRiTg+++++s   +   l  +g rL+++ +++g+pfefn+ v+ +
  TRIDC5AG059870.1 170 YMSANGAIAEAIKSENFVHIIDFHIAQGSQWITIIEALAARSGGPPCLRITGIDDSNSAyaRGGGLDMVGTRLHSVSASCGMPFEFNA-VHAA 261
                       *******************************************************988899999************************.6889 PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                        +++ le+L+++pgE+++Vn++++lh+++desvs+e++r+++++++kslsP+vv++veqe+++n+++F+ r le++eyy+a+f+s+++ lpr+
  TRIDC5AG059870.1 262 SHEVYLEHLDIRPGEVIVVNFAYELHHTPDESVSTENHRNRIIRMIKSLSPRVVTLVEQESNTNTAPFFSRYLETFEYYTAMFESIDVALPRD 354
                       99999**************************************************************************************** PP

              GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvS 371
                       ++ ri+ E+++l+r++ n++acegaer+er e ++kW++r+ +aGF+p+pls+ +++++k+ll +++s  yr+ee++g l+lgWk+r Lv+ S
  TRIDC5AG059870.1 355 DKRRISTEQHCLARDVINLIACEGAERVERLEAFGKWKARFAMAGFRPYPLSSLVNNTIKTLLDNYHSC-YRLEERDGVLYLGWKSRVLVVSS 446
                       *******************************************************************55.*********************** PP

              GRAS 372 aW 373
                       aW
  TRIDC5AG059870.1 447 AW 448
                       ** PP
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    
MRRLQPYTLI NLDRNLSQLN RCVMRPLDLN IIWFNSTLEN AILGPELDIS CDSPKSLLQA  60
KNLLKQGNWR QVLGINTGDL KQVIIACGKA AAENDIHTEV LISELRQLVS ISGDPMQRLG  120
AYMLEGLVAR LSFSGSKLYK SLKCKEPTSS ELISHMHHLS EICPFYRFSY MSANGAIAEA  180
IKSENFVHII DFHIAQGSQW ITIIEALAAR SGGPPCLRIT GIDDSNSAYA RGGGLDMVGT  240
RLHSVSASCG MPFEFNAVHA ASHEVYLEHL DIRPGEVIVV NFAYELHHTP DESVSTENHR  300
NRIIRMIKSL SPRVVTLVEQ ESNTNTAPFF SRYLETFEYY TAMFESIDVA LPRDDKRRIS  360
TEQHCLARDV INLIACEGAE RVERLEAFGK WKARFAMAGF RPYPLSSLVN NTIKTLLDNY  420
HSCYRLEERD GVLYLGWKSR VLVVSSAWC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein