PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG060800.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 241aa    MW: 26422.9 Da    PI: 8.0317
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG060800.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH56.93.6e-1855101455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        hn+ ErrRRdriN+++  L+el+P++      K +Ka+iL +A+eY+ksLq
  TRIDC5AG060800.4  55 VHNQSERRRRDRINEKMRSLQELIPHC-----NKADKASILDEAIEYLKSLQ 101
                       6*************************8.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
GSGLPSESGG HAHKRKGRGK DDSDSRSEDV ECEATEETKS SRQHGSKRRS RAAEVHNQSE  60
RRRRDRINEK MRSLQELIPH CNKADKASIL DEAIEYLKSL QMQVQIMWMT TGMAPMMFPG  120
SHQFMPPMAV GMNSACMPAA QGLNQMARVP YMNHSLSNHI PMSPSPAMNP MYIANQMQNI  180
QLREASNHFL HLDGGQATAP QVAGPYAYTP QVAPKSQIPE VPDCTAVPIS GPGQPPAPDG  240
I
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14764KRRSRAAEVHNQSERRRR
26065ERRRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09530.26e-36bHLH family protein