PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG060800.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 226aa    MW: 24964.4 Da    PI: 7.6145
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG060800.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH57.13.3e-184086455
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                       hn+ ErrRRdriN+++  L+el+P++      K +Ka+iL +A+eY+ksLq
  TRIDC5AG060800.6 40 VHNQSERRRRDRINEKMRSLQELIPHC-----NKADKASILDEAIEYLKSLQ 86
                      6*************************8.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
KGRGKDDSDS RSEDVECEAT EETKSSRQHG SKRRSRAAEV HNQSERRRRD RINEKMRSLQ  60
ELIPHCNKAD KASILDEAIE YLKSLQMQVQ IMWMTTGMAP MMFPGSHQFM PPMAVGMNSA  120
CMPAAQGLNQ MARVPYMNHS LSNHIPMSPS PAMNPMYIAN QMQNIQLREA SNHFLHLDGG  180
QATAPQVAGP YAYTPQVAPK SQIPEVPDCT AVPISGPGQP PAPDGI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13249KRRSRAAEVHNQSERRRR
24550ERRRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09530.21e-35bHLH family protein