PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG061240.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 170aa    MW: 19336.6 Da    PI: 4.6364
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG061240.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH22.32.2e-07120139625
                        -SGGGGTS--TTTTT-SS-S CS
            zf-CCCH   6 CrffartGtCkyGdrCkFaH 25 
                        C+f+++t  C++G rC++ H
  TRIDC5AG061240.11 120 CPFYLKTAACRFGVRCSRVH 139
                        ******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
AAAEEEARAA EASTRDKYND EHRDETEDDG EWEYVEDGPA EIIWQGNEII LKKKKIKIPK  60
RTEDKPLSQE EERPTSNPLP PQSVPVASQR REPSLSAREL LEKVAQETPN FGTEQDKAHC  120
PFYLKTAACR FGVRCSRVHF YPDKSCTLLM KNMYNGPGLV LEQDEGLEVC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10320.12e-53C3H family protein