PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG061240.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 172aa    MW: 19478.7 Da    PI: 4.6364
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG061240.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH22.32.3e-07122141625
                       -SGGGGTS--TTTTT-SS-S CS
           zf-CCCH   6 CrffartGtCkyGdrCkFaH 25 
                       C+f+++t  C++G rC++ H
  TRIDC5AG061240.5 122 CPFYLKTAACRFGVRCSRVH 141
                       ******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
AAAAAEEEAR AAEASTRDKY NDEHRDETED DGEWEYVEDG PAEIIWQGNE IILKKKKIKI  60
PKRTEDKPLS QEEERPTSNP LPPQSVPVAS QRREPSLSAR ELLEKVAQET PNFGTEQDKA  120
HCPFYLKTAA CRFGVRCSRV HFYPDKSCTL LMKNMYNGPG LVLEQDEGLE VC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10320.13e-53C3H family protein