PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG062780.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 237aa    MW: 25196.2 Da    PI: 11.3411
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG062780.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind781.6e-24128186260
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60 
                       Fl k+y++++d++++ ++sws+++nsfvv+d++ fa+ +Lp+yFkh nf+SFvRQLn+Y
  TRIDC5AG062780.3 128 FLAKTYDMVDDPATDAVVSWSATNNSFVVWDPHLFATVLLPRYFKHGNFSSFVRQLNTY 186
                       9********************999**********************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
PTRTASRTFH PPSQAKPSQA AAAATATSLS SSAAAAAGAR RASSRAHSPA LLSRASRAHL  60
RHIKACTGEK PHPISGARRR GPLLVGPAAA MSHRMMMNPV KVEGDGRAGG GGAPRPMDGL  120
GDAGPTPFLA KTYDMVDDPA TDAVVSWSAT NNSFVVWDPH LFATVLLPRY FKHGNFSSFV  180
RQLNTYVSIR PLLAALLGPL CPKIDSLMPI ARVRNEWSLM GLLKVLEYLL TLGLLKF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.16e-31HSF family protein