PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG063430.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 279aa    MW: 29935.8 Da    PI: 6.5187
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG063430.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.32.7e-08129173554
                       HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       h+++Er RR+ri +++  L+el+P+       K + a +L +  +Y+k L
  TRIDC5AG063430.1 129 HSIAERLRRERIAERMRALQELVPNT-----NKTDRAVMLDEILDYVKFL 173
                       99***********************7.....59**************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MAGQPPQGPE DDFLDQFFSL TNSLSAAGRP SGDQPFSLAL SLDAASDACG SRGGIGDDPG  60
HERDGVQLPG LFPPVFGGGL QPPHLRPSHP PPQMFHAQQP KQGGPAGGPQ PPAPRPKVRA  120
RRGQATDPHS IAERLRRERI AERMRALQEL VPNTNKTDRA VMLDEILDYV KFLRLQVKVL  180
SMSRLGGAGA VAQLVSDIPL SVKGEASDGG SKQQVWEKWS TDGTEKQVAK LMDEDIGAAM  240
QFLQSKALCM MPVSLAMAIY DTQHSQDGQP VKPEPNNTA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1134139RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.38e-64bHLH family protein