PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG063570.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 181aa    MW: 19672 Da    PI: 9.7042
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG063570.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix58.12.4e-18441002685
          trihelix  26 lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 
                       + +p+W++v++++r++g+er+++qC+++w+nl++++kkike+e+  +     + p f  +
  TRIDC5AG063570.3  44 ALEPKWAAVAEYCRRHGVERGAVQCRKRWSNLAGDWKKIKEWERAAAGA---REPSFWAM 100
                       5589****************************************86333...34667666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
PRRRPTRRCA PRGCPAGRGR RYWCSSRLAA AAAAGATGEG AAAALEPKWA AVAEYCRRHG  60
VERGAVQCRK RWSNLAGDWK KIKEWERAAA GAREPSFWAM RNDARRERRL PGFFDREVYG  120
ILEGRGRGVV AGSSSGGGAA VEEVGVVRME EDDDEETGEE EEERGKGKER GGGPLLGGGR  180
C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.12e-35Trihelix family protein