PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG066970.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 366aa MW: 40651.8 Da PI: 7.1281

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG066970.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.9	3.5e-52	56	182	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtd+elv +yL++k++g++l++ +i+evd+y+++Pw Lp ++ +++ewyfF++rd+ky++g+r+nra+ +gyWkatg dk+v TRIDC5AG066970.1 56 LPPGFRFHPTDDELVEHYLCRKAAGQRLPV-PIIAEVDLYRFDPWALPDRALFGTREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVA 147 79**************************.88***********77778999********************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++g+++g+kk Lvfy g+apkg+ktdW+mheyrl TRIDC5AG066970.1 148 PRGGRTMGIKKALVFYAGKAPKGVKTDWIMHEYRL 182 *******************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
PHHTTPHLTR PQSRTTAVGS IIIGSGAIPS TSFLQTDMGM PAVRRRERDA EAELNLPPGF 60 RFHPTDDELV EHYLCRKAAG QRLPVPIIAE VDLYRFDPWA LPDRALFGTR EWYFFTPRDR 120 KYPNGSRPNR AAGNGYWKAT GADKPVAPRG GRTMGIKKAL VFYAGKAPKG VKTDWIMHEY 180 RLADAGRAAA SKKGSLRLDD WVLCRLYNKK NEWEKMQLQQ QGEEETMMEP KAENTASDMV 240 VTSHSHSQSQ SHSHSWGEAR TPESEIVDND PSLFQQATAA AFQAQSPAAA AAHQEMMATL 300 MVPKKEAADE AGRNDLFVDL SYDDIQSMYN GLDMMPPGDD LLYYSLFASP RVRGSQPGAG 360 GMPAPF

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

PHHTTPHLTR PQSRTTAVGS IIIGSGAIPS TSFLQTDMGM PAVRRRERDA EAELNLPPGF  60
RFHPTDDELV EHYLCRKAAG QRLPVPIIAE VDLYRFDPWA LPDRALFGTR EWYFFTPRDR  120
KYPNGSRPNR AAGNGYWKAT GADKPVAPRG GRTMGIKKAL VFYAGKAPKG VKTDWIMHEY  180
RLADAGRAAA SKKGSLRLDD WVLCRLYNKK NEWEKMQLQQ QGEEETMMEP KAENTASDMV  240
VTSHSHSQSQ SHSHSWGEAR TPESEIVDND PSLFQQATAA AFQAQSPAAA AAHQEMMATL  300
MVPKKEAADE AGRNDLFVDL SYDDIQSMYN GLDMMPPGDD LLYYSLFASP RVRGSQPGAG  360
GMPAPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01720.1	3e-86	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG066970.1