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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | TRIDC5AG066970.3 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family | NAC | ||||||||
| Protein Properties | Length: 240aa MW: 27605.7 Da PI: 12.2551 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 169.3 | 1.3e-52 | 19 | 145 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93
lppGfrFhPtd+elv +yL++k++g++l++ +i+evd+y+++Pw Lp ++ +++ewyfF++rd+ky++g+r+nra+ +gyWkatg dk+v
TRIDC5AG066970.3 19 LPPGFRFHPTDDELVEHYLCRKAAGQRLPV-PIIAEVDLYRFDPWALPDRALFGTREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVA 110
79****************************.88***************77778999************************************* PP
NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
++g+++g+kk Lvfy g+apkg+ktdW+mheyrl
TRIDC5AG066970.3 111 PRGGRTMGIKKALVFYAGKAPKGVKTDWIMHEYRL 145
*********************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 240 aa Download sequence |
MGMPAVRRRE RDAEAELNLP PGFRFHPTDD ELVEHYLCRK AAGQRLPVPI IAEVDLYRFD 60 PWALPDRALF GTREWYFFTP RDRKYPNGSR PNRAAGNGYW KATGADKPVA PRGGRTMGIK 120 KALVFYAGKA PKGVKTDWIM HEYRLADAGR AAASKKGSLR VRYCWTTGCS AGSTTRRTSG 180 RRCSCSSKGK RRRPSRTRTR GARRARRSRR SSTTTRRCSS RRRRRRSRPR APRPPRRTRR |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 217 | 226 | RCSSRRRRRR |
| 2 | 221 | 226 | RRRRRR |
| 3 | 221 | 228 | RRRRRRSR |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G01720.1 | 2e-75 | NAC family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | TRIDC5AG066970.3 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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